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Prepare
[lxplus]cat digigrid.jdl
############# Athena #################
Executable = "athena_digi02.sh";
StdOutput = "athena_digi.out";
StdError = "athena_digi.err";
InputSandbox = {"athena_digi02.sh","vbfDigiOptions.py"};
OutputSandbox= {"athena_digi.out","athena_digi.err","athena_result.out", "CLIDDBout.txt"};
Requirements = Member("VO-atlas-release-10.0.1", other.GlueHostApplicationSoftwareRunTimeEnvironment);
######################################
[lxplus]cat athena_digi02.sh
#!/bin/bash
source $VO_ATLAS_SW_DIR/software/10.0.1/setup.sh
source $SITEROOT/dist/10.0.1/Control/AthenaRunTime/*/cmt/setup.sh
# Get the File
lcg-cp -v --vo atlas lfn:stdenis_vbfsim_002.pool.root \
file://`pwd`/vbfg4hits.pool.root
# Insert the file into the FileCatalog
pool_insertFileToCatalog vbfg4hits.pool.root
# Run the job:
cp $SITEROOT/dist/10.0.1/InstallArea/share/PDGTABLE.MeV .
athena.py vbfDigiOptions.py Digitization/AtlasDigitization.py > athena_result.out 2>&1
ls -l
hostname
lcg-cr -v --vo atlas -d \
-l lfn:stdenis_vbfdigi_002.pool.root file://`pwd`/vbfg4digi.pool.root
[lxplus]edg-job-submit -vo atlas -o jid1 digigrid.jdl
Selected Virtual Organisation name (from --vo option): atlas
Connecting to host gdrb03.cern.ch, port 7772
Logging to host gdrb03.cern.ch, port 9002
================================ edg-job-submit Success =====================================
The job has been successfully submitted to the Network Server.
Use edg-job-status command to check job current status. Your job identifier (edg_jobId) is:
- https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
The edg_jobId has been saved in the following file:
/afs/cern.ch/user/s/stdenis/testarea/10.0.1/PhysicsAnalysis/AnalysisCommon/UserAnalysis/UserAnalysis-00-02-02/share/jid1
=============================================================================================
[lxplus]export JOB=https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
[lxplus]./ckjob
Wed Nov 23 21:34:20 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
Current Status: Scheduled
Status Reason: Job successfully submitted to Globus
Destination: ce01.esc.qmul.ac.uk:2119/jobmanager-lcgpbs-lcg2_short
reached on: Wed Nov 23 20:32:35 2005
*************************************************************
Wed Nov 23 21:35:21 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
Current Status: Running
Status Reason: Job successfully submitted to Globus
Destination: ce01.esc.qmul.ac.uk:2119/jobmanager-lcgpbs-lcg2_short
reached on: Wed Nov 23 20:34:56 2005
*************************************************************
Results
Wed Nov 23 21:43:05 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
Current Status: Running
Status Reason: Job successfully submitted to Globus
Destination: ce01.esc.qmul.ac.uk:2119/jobmanager-lcgpbs-lcg2_short
reached on: Wed Nov 23 20:34:56 2005
*************************************************************
Wed Nov 23 21:44:06 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
Current Status: Done (Success)
Exit code: 1
Status Reason: Job terminated successfully
Destination: ce01.esc.qmul.ac.uk:2119/jobmanager-lcgpbs-lcg2_short
reached on: Wed Nov 23 20:43:14 2005
*************************************************************
[lxplus]edg-job-get-output -dir . $JOB
Retrieving files from host: gdrb03.cern.ch ( for https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig )
*********************************************************************************
JOB GET OUTPUT OUTCOME
Output sandbox files for the job:
- https://gdrb03.cern.ch:9000/XzUt89QVQGZhmUgx5tPZig
have been successfully retrieved and stored in the directory:
/afs/cern.ch/user/s/stdenis/testarea/10.0.1/PhysicsAnalysis/AnalysisCommon/UserAnalysis/UserAnalysis-00-02-02/share/stdenis_XzUt89QVQGZhmUgx5tPZig
*********************************************************************************
[lxplus]ls stdenis_XzUt89QVQGZhmUgx5tPZig
athena_digi.err athena_digi.out athena_result.out CLIDDBout.txt
[lxplus]cat stdenis_XzUt89QVQGZhmUgx5tPZig/athena_digi.out
Source URL: lfn:stdenis_vbfsim_002.pool.root
File size: 2155152
VO name: atlas
Source URL for copy: gsiftp://pool1-gla.scotgrid.ac.uk/pool1-gla:/gridstorage/d1/atlas/2005-11-23/file7fc3fef4-4ba3-4fe6-9aea-df16f9b49555.2076.0
Destination URL: file:///data/scratch/lcg/atlas010/globus-tmp.cn156.11069.0/WMS_cn156_011545_https_3a_2f_2fgdrb03.cern.ch_3a9000_2fXzUt89QVQGZhmUgx5tPZig/vbfg4hits.pool.root
# streams: 1
# set timeout to 0 (seconds)
Transfer took 2830 ms
total 10152
-rwxr-xr-x 1 atlas010 atlas 594 Nov 23 20:33 athena_digi02.sh
-rw-r--r-- 1 atlas010 atlas 3463 Nov 23 20:34 athena_digi.err
-rw-r--r-- 1 atlas010 atlas 465 Nov 23 20:34 athena_digi.out
-rw-r--r-- 1 atlas010 atlas 108929 Nov 23 20:41 athena_result.out
-rw-r--r-- 1 atlas010 atlas 87 Nov 23 20:41 AtRndmGenSvc.out
-rw-r--r-- 1 atlas010 atlas 0 Nov 23 20:34 cdb.log
-rw-r--r-- 1 atlas010 atlas 12437 Nov 23 20:41 CLIDDBout.txt
-rwxr-xr-x 1 atlas010 atlas 32957 Nov 23 20:34 PDGTABLE.MeV
-rw-r--r-- 1 atlas010 atlas 499 Nov 23 20:41 PoolFileCatalog.xml
-rw-r--r-- 1 atlas010 atlas 331 Nov 23 20:34 PoolFileCatalog.xml.BAK
-rw-r--r-- 1 atlas010 atlas 0 Nov 23 20:41 tape.avpul
-rw-r--r-- 1 atlas010 atlas 401 Nov 23 20:33 vbfDigiOptions.py
-rw-r--r-- 1 atlas010 atlas 8019983 Nov 23 20:41 vbfg4digi.pool.root
-rw-r--r-- 1 atlas010 atlas 2155152 Nov 23 20:34 vbfg4hits.pool.root
cn156
Using grid catalog type: edg
[lxplus][lxplus]cat stdenis_XzUt89QVQGZhmUgx5tPZig/athena_digi.err
0 bytes 0.00 KB/sec avg 0.00 KB/sec instWarning in : no dictionary for class HepMC::WeightContainer is available
Warning in : no dictionary for class Hep3Vector is available
Warning in : no dictionary for class HepLorentzVector is available
Warning in : no dictionary for class HepMC::GenVertex is available
Warning in : no dictionary for class HepMC::Polarization is available
Warning in : no dictionary for class HepMC::Flow is available
Warning in : no dictionary for class HepMC::GenParticle is available
Warning in : no dictionary for class HepMC::GenEvent is available
Warning in : no dictionary for class DataVector is available
Warning in : no dictionary for class TriggerInfo is available
Warning in : no dictionary for class EventType is available
Warning in : no dictionary for class EventID is available
Warning in : no dictionary for class EventInfo is available
Warning in : no dictionary for class McEventCollection is available
Warning in : no dictionary for class DataHeaderElement is available
Warning in : no dictionary for class DataHeader is available
Warning in : no dictionary for class HepMcParticleLink::ExtendedBarCode is available
Warning in : no dictionary for class HepMcParticleLink is available
Warning in : no dictionary for class SiHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class Identifier is available
Warning in : no dictionary for class LArHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class LArHitContainer is available
Warning in : no dictionary for class TileHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class RPCSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class TGCSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class CSCSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class MDTSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class TRTUncompressedHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class TrackRecord is available
Warning in : no dictionary for class AthenaHitsVector is available
WARNING: $POOL_CATALOG is not defined
using default `xmlcatalog_file:PoolFileCatalog.xml'
SE type not found
lcg_cr: Invalid argument
[lxplus]
Messed up the store: forgot to repast the destination store location
Submit again
[lxplus]edg-job-submit -vo atlas -o jid1 digigrid.jdl
Selected Virtual Organisation name (from --vo option): atlas
Connecting to host gdrb03.cern.ch, port 7772
Logging to host gdrb03.cern.ch, port 9002
================================ edg-job-submit Success =====================================
The job has been successfully submitted to the Network Server.
Use edg-job-status command to check job current status. Your job identifier (edg_jobId) is:
- https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
The edg_jobId has been saved in the following file:
/afs/cern.ch/user/s/stdenis/testarea/10.0.1/PhysicsAnalysis/AnalysisCommon/UserAnalysis/UserAnalysis-00-02-02/share/jid1
=============================================================================================
[lxplus]export JOB=https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
[lxplus]cat athena_digi02.sh
#!/bin/bash
source $VO_ATLAS_SW_DIR/software/10.0.1/setup.sh
source $SITEROOT/dist/10.0.1/Control/AthenaRunTime/*/cmt/setup.sh
# Get the File
lcg-cp -v --vo atlas lfn:stdenis_vbfsim_002.pool.root \
file://`pwd`/vbfg4hits.pool.root
# Insert the file into the FileCatalog
pool_insertFileToCatalog vbfg4hits.pool.root
# Run the job:
cp $SITEROOT/dist/10.0.1/InstallArea/share/PDGTABLE.MeV .
athena.py vbfDigiOptions.py Digitization/AtlasDigitization.py > athena_result.out 2>&1
ls -l
hostname
lcg-cr -v --vo atlas -d se2-gla.scotgrid.ac.uk \
-l lfn:stdenis_vbfdigi_002.pool.root file://`pwd`/vbfg4digi.pool.root
[lxplus]
[lxplus]./ckjob
Wed Nov 23 22:09:55 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
Current Status: Scheduled
Status Reason: Job successfully submitted to Globus
Destination: golias25.farm.particle.cz:2119/jobmanager-lcgpbs-lcgatlasprod
reached on: Wed Nov 23 21:09:19 2005
*************************************************************
Wed Nov 23 22:11:56 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
Current Status: Scheduled
Status Reason: Job successfully submitted to Globus
Destination: golias25.farm.particle.cz:2119/jobmanager-lcgpbs-lcgatlasprod
reached on: Wed Nov 23 21:09:19 2005
*************************************************************
Wed Nov 23 22:12:57 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
Current Status: Running
Status Reason: Job successfully submitted to Globus
Destination: golias25.farm.particle.cz:2119/jobmanager-lcgpbs-lcgatlasprod
reached on: Wed Nov 23 21:12:35 2005
*************************************************************
Wed Nov 23 22:18:59 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
Current Status: Running
Status Reason: Job successfully submitted to Globus
Destination: golias25.farm.particle.cz:2119/jobmanager-lcgpbs-lcgatlaspro d
reached on: Wed Nov 23 21:12:35 2005
*************************************************************
Wed Nov 23 22:20:00 CET 2005
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
Current Status: Done (Success)
Exit code: 0
Status Reason: Job terminated successfully
Destination: golias25.farm.particle.cz:2119/jobmanager-lcgpbs-lcgatlaspro d
reached on: Wed Nov 23 21:19:58 2005
*************************************************************
Results
[lxplus]edg-job-get-output -dir . $JOB
Retrieving files from host: gdrb03.cern.ch ( for https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ )
*********************************************************************************
JOB GET OUTPUT OUTCOME
Output sandbox files for the job:
- https://gdrb03.cern.ch:9000/0dicUm2953L_CXg6CS7IKQ
have been successfully retrieved and stored in the directory:
/afs/cern.ch/user/s/stdenis/testarea/10.0.1/PhysicsAnalysis/AnalysisCommon/UserAnalysis/UserAnalysis-00-02-02/share/stdenis_0dicUm2953L_CXg6CS7IKQ
*********************************************************************************
[lxplus]cat stdenis_0dicUm2953L_CXg6CS7IKQ/athena_digi.err
Warning in : no dictionary for class HepMC::WeightContainer is available
Warning in : no dictionary for class Hep3Vector is available
Warning in : no dictionary for class HepLorentzVector is available
Warning in : no dictionary for class HepMC::GenVertex is available
Warning in : no dictionary for class HepMC::Polarization is available
Warning in : no dictionary for class HepMC::Flow is available
Warning in : no dictionary for class HepMC::GenParticle is available
Warning in : no dictionary for class HepMC::GenEvent is available
Warning in : no dictionary for class DataVector is available
Warning in : no dictionary for class TriggerInfo is available
Warning in : no dictionary for class EventType is available
Warning in : no dictionary for class EventID is available
Warning in : no dictionary for class EventInfo is available
Warning in : no dictionary for class McEventCollection is availableWarning in : no dictionary for class DataHeaderElement is availableWarning in : no dictionary for class DataHeader is available
Warning in : no dictionary for class HepMcParticleLink::ExtendedBarCode is available
Warning in : no dictionary for class HepMcParticleLink is availableWarning in : no dictionary for class SiHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class Identifier is available
Warning in : no dictionary for class LArHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class LArHitContainer is available
Warning in : no dictionary for class TileHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class RPCSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class TGCSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class CSCSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class MDTSimHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class TRTUncompressedHit is available
Warning in : no dictionary for class AthenaHitsVector is available
Warning in : no dictionary for class TrackRecord is available
Warning in : no dictionary for class AthenaHitsVector is available
WARNING: $POOL_CATALOG is not defined
using default `xmlcatalog_file:PoolFileCatalog.xml'
[lxplus]
[lxplus]cat stdenis_0dicUm2953L_CXg6CS7IKQ/athena_digi.out
Source URL: lfn:stdenis_vbfsim_002.pool.root
File size: 2155152
Source URL for copy: gsiftp://pool1-gla.scotgrid.ac.uk/pool1-gla:/gridstorage/d1/atlas/2005-11-23/file7fc3fef4-4ba3-4fe6-9aea-df16f9b49555.2076.0
Destination URL: file:///scratch/WMS_goliasx74_028482_https_3a_2f_2fgdrb03.cern.ch_3a9000_2f0dicUm2953L_5fCXg6CS7IKQ/vbfg4hits.pool.root
# streams: 1
Transfer took 4830 ms
total 10208
-rw-r--r-- 1 atlas008 atlas 87 Nov 23 22:15 AtRndmGenSvc.out
-rw-r--r-- 1 atlas008 atlas 12437 Nov 23 22:15 CLIDDBout.txt
-rwxr-xr-x 1 atlas008 atlas 32957 Nov 23 22:11 PDGTABLE.MeV
-rw-r--r-- 1 atlas008 atlas 499 Nov 23 22:15 PoolFileCatalog.xml
-rw-r--r-- 1 atlas008 atlas 331 Nov 23 22:11 PoolFileCatalog.xml.BAK
-rw-r--r-- 1 atlas008 atlas 3274 Nov 23 22:11 athena_digi.err
-rw-r--r-- 1 atlas008 atlas 382 Nov 23 22:11 athena_digi.out
-rwxr-xr-x 1 atlas008 atlas 616 Nov 23 22:10 athena_digi02.sh
-rw-r--r-- 1 atlas008 atlas 108912 Nov 23 22:15 athena_result.out
-rw-r--r-- 1 atlas008 atlas 0 Nov 23 22:11 cdb.log
-rw-r--r-- 1 atlas008 atlas 0 Nov 23 22:15 tape.avpul
-rw-r--r-- 1 atlas008 atlas 401 Nov 23 22:10 vbfDigiOptions.py
-rw-r--r-- 1 atlas008 atlas 8020113 Nov 23 22:15 vbfg4digi.pool.root
-rw-r--r-- 1 atlas008 atlas 2155152 Nov 23 22:11 vbfg4hits.pool.root
goliasx74.farm.particle.cz
Using grid catalog type: edg
Source URL: file:///scratch/WMS_goliasx74_028482_https_3a_2f_2fgdrb03.cern.ch_3a9000_2f0dicUm2953L_5fCXg6CS7IKQ/vbfg4digi.pool.root
File size: 8020113
Destination specified: se2-gla.scotgrid.ac.uk
Destination URL for copy: gsiftp://pool1-gla.scotgrid.ac.uk/pool1-gla:/gridstorage/e1/atlas/2005-11-23/filee1cf6be5-d3b1-4738-b5cd-08ed80df4421.2079.0
# streams: 1
Alias registered in Catalog: lfn:stdenis_vbfdigi_002.pool.root
Transfer took 10020 ms
Destination URL registered in Catalog: srm://se2-gla.scotgrid.ac.uk/dpm/scotgrid.ac.uk/home/atlas/generated/2005-11-23/filee1cf6be5-d3b1-4738-b5cd-08ed80df4421
guid:1f7d9704-cead-4b81-840f-18540179784f
[lxplus]
Results too 99s and are shown here:athena_digigridresult23Nov051524.txt
Major updates:
-- RichardStDenis - 23 Nov 2005 %RESPONSIBLE%
%REVIEW%
Edit | Attach | Topic revision: r1 - 2005-11-23 - RichardStDenis
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